PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289033.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 460aa MW: 50598.4 Da PI: 8.6719

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.3	9.1e-10	174	215	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L XP_021289033.1 174 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 215 6889*************************9777777666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MGSRAVNIGI ENDKKAVTAM PSYVPTVPTS NPRLAEANAI HSSXIADLGT LVQSLGFCID 60 GRNPLFNQIQ SSTQAIADAQ FGAINKTLAS ADNNLSAAIV GLQTLTLKKD TSPNLVSLSA 120 GWENWGNSNM ADASPRTDTS TDDTDEKNQR FERGQTNAIV ASDSSDRSKD KTDQKTLRRL 180 AQNREAARKS RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ QGIFISSSGD QSHSMSGNGA 240 LAFDVEYARW LEEHNRQINE LRAAVNSHAG DTELRTIVDN VTAHFDDIFR LKGIAAKADV 300 FHILSGMWKT PAERCFLWIG GFRSSELLKL LANQLEPLTE QQFMGIHNLQ QSSQQAEDAL 360 SQGMEALQQS LAETLTNGSP GPSGSSGNVA NYMGQMAMAM GKLGTLEGFV RQADNLRQQT 420 LQQMHRILTT RQSARALLAI NDYFSRLRAL SSLWLARPRE

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MGSRAVNIGI ENDKKAVTAM PSYVPTVPTS NPRLAEANAI HSSXIADLGT LVQSLGFCID  60
GRNPLFNQIQ SSTQAIADAQ FGAINKTLAS ADNNLSAAIV GLQTLTLKKD TSPNLVSLSA  120
GWENWGNSNM ADASPRTDTS TDDTDEKNQR FERGQTNAIV ASDSSDRSKD KTDQKTLRRL  180
AQNREAARKS RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ QGIFISSSGD QSHSMSGNGA  240
LAFDVEYARW LEEHNRQINE LRAAVNSHAG DTELRTIVDN VTAHFDDIFR LKGIAAKADV  300
FHILSGMWKT PAERCFLWIG GFRSSELLKL LANQLEPLTE QQFMGIHNLQ QSSQQAEDAL  360
SQGMEALQQS LAETLTNGSP GPSGSSGNVA NYMGQMAMAM GKLGTLEGFV RQADNLRQQT  420
LQQMHRILTT RQSARALLAI NDYFSRLRAL SSLWLARPRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06950.4	1e-138	bZIP family protein