PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288938.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB_related | ||||||||
Protein Properties | Length: 193aa MW: 22332.8 Da PI: 4.7543 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.2 | 1e-09 | 46 | 70 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W+ Iar+++ gRt++++k++w+++l XP_021288938.1 46 RWSMIARRLP-GRTDNEIKNYWRTHL 70 5*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MAISVLKRKR SSYNFMSDGA TSESVPSSWI FFFSFPSLKS SILFCRWSMI ARRLPGRTDN 60 EIKNYWRTHL RKKALIQEQE NFQFGRDNGK QLFLFQEDGS SAQNYNGESY KPCKDILDTE 120 NSCYDVVGLS DFTLTSSPYQ TRLSDLIPEF PSDQSEIKSQ EDCNSSDSRY CYPAWISEEN 180 DLWGCSGSLW NME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 1e-20 | MYB family protein |