PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288657.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 187aa MW: 21550.6 Da PI: 9.2634 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 93.4 | 3.8e-29 | 41 | 167 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppG+rF Ptd+el+ +yL +kv+g++l+ e++++++iy + ePw++ ++ ++ ++ y F+k ++k +gkr +r++ +g+Wk + + +v XP_021288657.1 41 VPPGYRFAPTDDELILHYLSNKVKGEPLPS-EAVTDCEIYGHqdkEPWKIF-NM-TSPRKFYVFTKLKNK-GKGKRIERTAGRGTWKGQRT-DPV 130 69**************************99.889999999876669****6.44.356788999998776.68**************8866.789 PP NAM 93 lskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 ++++g+++g kk +vf kg+ + +k +W+mhey+l XP_021288657.1 131 KDSDGNHIGFKKLFVFEvKGDGANNVKGHWLMHEYSL 167 999*************979999999**********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MTTQLQLDHS FHQSAMPELL LSPTHDHLHY LYFDHSTFTW VPPGYRFAPT DDELILHYLS 60 NKVKGEPLPS EAVTDCEIYG HQDKEPWKIF NMTSPRKFYV FTKLKNKGKG KRIERTAGRG 120 TWKGQRTDPV KDSDGNHIGF KKLFVFEVKG DGANNVKGHW LMHEYSLLTQ VSFLPILSPP 180 LHAFVRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 3e-22 | NAC family protein |