PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288637.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 234aa    MW: 25886.3 Da    PI: 8.6681
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.66.9e-1177124454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL ++l +    + +K +Ka++L  Av+ + +L
  XP_021288637.1  77 SKACREKLRRDRLNDKFMELGSILEPG---RPPKTDKAAVLIDAVRMVTQL 124
                     5678**********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVSPESSNYW SHFDYATLID DIPDGPYSGF SWPAQPTNAP SNVVSVENDG SLGDSDGLKE  60
SGSKKRVRSE SCNPSSSKAC REKLRRDRLN DKFMELGSIL EPGRPPKTDK AAVLIDAVRM  120
VTQLRGEAQK LKDSNSSLQE KIKELKSEKN ELRDEKQRLK AEKERLEQQL KAMNAQPSFM  180
PPAPAIPAAF AAARSSSWNK LVPFIGYPGV AMWQFMPPAA VDTSQDHVLR PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-103bHLH family protein