PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288581.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 193aa    MW: 21334.2 Da    PI: 4.8332
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288581.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-191464155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr++k +g+Wv+eIr+p   gk++r++lg++ tae+Aa+a++ a++ ++g
  XP_021288581.1 14 SNYRGVRQRK-WGKWVSEIREP---GKKTRIWLGSYETAEMAAAAYDVAALHFRG 64
                    57*******9.**********8...557***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEHEVDRHAR VTPSNYRGVR QRKWGKWVSE IREPGKKTRI WLGSYETAEM AAAAYDVAAL  60
HFRGRAARLN FPELVDSLPR PASSSAEDVQ MAAQEAALRL RRPKISSEVA MGACAGTGAA  120
AAADGRLGPI RVGLSQSQIQ AINEFPLDSP KMWMELAGAL LMAEPTLYGD EFDDAELMIS  180
EYEEIVQVES IWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.12e-49ERF family protein