PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 173aa MW: 20252.8 Da PI: 7.7609 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.6 | 2.2e-18 | 14 | 67 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ ++++eq++eLe+ F+ n+++ e + +LA++lg++ rqV +W+qN+Ra++k XP_021288580.1 14 NKKRLNQEQVRELEKSFAANKKLEPELKLHLANQLGVPPRQVAIWYQNKRARWK 67 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 107.1 | 1.3e-34 | 14 | 105 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl++eqv+ LE+sF +++kLepe K +la++Lg+ prqva+W+qn+RAR+kt++lE dy++L+ ++++ +e+++Lek+v++L+eel++ XP_021288580.1 14 NKKRLNQEQVRELEKSFAANKKLEPELKLHLANQLGVPPRQVAIWYQNKRARWKTQNLELDYNTLQVKLENALSEKRMLEKDVKHLQEELRK 105 79***************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MDFHSQKLYA PKHNKKRLNQ EQVRELEKSF AANKKLEPEL KLHLANQLGV PPRQVAIWYQ 60 NKRARWKTQN LELDYNTLQV KLENALSEKR MLEKDVKHLQ EELRKAQEMM FSMNNYQKDP 120 RHHPPPFVSC TSAGSSEEGG SSSFHEDNVH DHEVLQIDEL YACLIGADRS TWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 1e-42 | HD-ZIP family protein |