PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021288467.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 294aa MW: 33477.5 Da PI: 7.5613

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021288467.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.5	1.1e-48	17	144	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPtdeel+++yL++kv++k++++ e ik++diyk++PwdLpk +++e++ yfF+kr +ky+++ r+nr+t sg+Wkatg dk+v+s+ XP_021288467.1 17 PGFRFHPTDEELLSFYLQRKVDKKPIKI-ELIKQMDIYKYDPWDLPKPSSEGESDSYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHgg 110 9*************************.89***********8777888999********************************955 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLv+y g+a kg+ktdW+mhe+rl XP_021288467.1 111 eGHVCIGLKKTLVYYCGSAGKGTKTDWMMHEFRL 144 44445*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MNFQDSAAKM DEDVPLPGFR FHPTDEELLS FYLQRKVDKK PIKIELIKQM DIYKYDPWDL 60 PKPSSEGESD SYFFCKRGRK YRNSIRPNRV TGSGFWKATG IDKPVYSHGG EGHVCIGLKK 120 TLVYYCGSAG KGTKTDWMMH EFRLPSNDNN TSLSDPQYVQ EAEVWTICRI LKRNASHRKL 180 YTPDWREVAA KRHSTNRTSS QTCIVESNNY ENYISFGDSI PQHQAVNRTN GRSQWHAAAA 240 AAADQLSTMA QPQTQLPFIS PSLSFSNPEA DLVTYANWDE LTSVVEFALD PSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12910.1	2e-90	NAC family protein