PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288334.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 194aa MW: 22339.7 Da PI: 9.118 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71.1 | 3e-22 | 43 | 151 | 1 | 112 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrF Ptd++l+ +yL +kv+g+ l+ e++++++iy + ePw++ ++ ++ ++ y F+k ++k +gkr +r++ +g+Wk + + +v XP_021288334.1 43 VPPGFRFAPTDDQLILHYLSNKVKGELLPS-EAVTDCEIYGHqdkEPWKIF-SM-TSPRKFYVFTKLKNK-GKGKRIERTAGRGTWKGQRT-DPV 132 69*************************999.889999999876669****6.44.456789999998776.68**************8866.789 PP NAM 93 lskkgelvglkktLvfykgr 112 ++++g+++g kk +vf gr XP_021288334.1 133 KDSDGNHIGFKKLFVFE-GR 151 999*************6.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MTKQLELDHS FHQSTMTELL LSPTHDELDH VYLYFDHSTS TYVPPGFRFA PTDDQLILHY 60 LSNKVKGELL PSEAVTDCEI YGHQDKEPWK IFSMTSPRKF YVFTKLKNKG KGKRIERTAG 120 RGTWKGQRTD PVKDSDGNHI GFKKLFVFEG RCQTMSMTLA HARVSLLTQS DYVLCAIRNK 180 KPLNPLLNKL DMIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 8e-18 | NAC family protein |