PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288315.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 22488.4 Da PI: 7.4146 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 37 | 87 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr +k +g+Wv+eIr+p gk++r++lg+f t+e+Aa+a++ a++ l+g XP_021288315.1 37 STYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVAALHLRG 87 56*****999.**********8...557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MYLIYMKQST SSRKKQGINT YMEGKNSSSA TRGGVSSTYR GVRKRKWGKW VSEIREPGKK 60 TRIWLGSFET PEMAAAAYDV AALHLRGREA RLNFPELIDC LPRPPSSNGE DIRMAAHEAA 120 LRVRTNAAGS SSEAGASSSS VGPVTVRLSP TQIQAINESP LDSPKMWMQM SEALMMDEAM 180 MFCNENGENE WDDMQNDSLW DP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 1e-57 | ERF family protein |