PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 293aa MW: 33442.5 Da PI: 8.3036 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 157.8 | 4.4e-49 | 18 | 146 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv +yL++kv++k++++ e ik++diyk++PwdLp + +e+e yfF+kr +ky+++ r+nr+t sg+Wkatg dk+v+s+ XP_021288307.1 18 PGFRFHPTDEELVGFYLRRKVDRKPIRM-ELIKTIDIYKYDPWDLPtEPSIVGESESYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSQg 111 9***************************.99***************433334789**************************************95 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkktLv+y+g+a kg+ktdW+mhe+r+ XP_021288307.1 112 gqGHACIGLKKTLVYYRGTAGKGTKTDWMMHEFRM 146 544445***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MNLVQATADN KDEDVPLPGF RFHPTDEELV GFYLRRKVDR KPIRMELIKT IDIYKYDPWD 60 LPTEPSIVGE SESYFFCKRG RKYRNSIRPN RVTGSGFWKA TGIDKPVYSQ GGQGHACIGL 120 KKTLVYYRGT AGKGTKTDWM MHEFRMPSND SNTNTSLSNP KSIAQEAEVW TICRIFKRNA 180 SQRKYTPDWR EVAAKRPSTS TPSSQTCSVE SNSHETYISF GSEVVQHYDE KPVVNHINGR 240 SQWHVDQLST IAQPSSMASS SSFSNFPETD FFTHANWDEL KSVVEFALDP LLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12910.1 | 6e-88 | NAC family protein |