PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288210.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 302aa    MW: 33564.6 Da    PI: 9.1933
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1806.2e-56141421129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yL kkv +++++  ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+
  XP_021288210.1  14 LPPGFRFHPTDEELITYYLLKKVLDSSFTG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSS 107
                     79*************************999.89***************99999****************************************97 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      + +lvg+kktLvfy+grapkgek++Wvmheyrle
  XP_021288210.1 108 kTCALVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 142
                     45567****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDSYHHFDNG DTHLPPGFRF HPTDEELITY YLLKKVLDSS FTGRAIAEVD LNKCEPWELP  60
EKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKTC ALVGMKKTLV  120
FYRGRAPKGE KSNWVMHEYR LEGKFAYHYL SRSSKDEWVI SRVFQKSGSG SGATSSTGGG  180
AKKTRTNASV ALYQEPSSPS SVSLPPLLDP TTAATATTAT SLTDRDSCSY DSHSQPEHVS  240
CFSTIAAAAA SAAATTPAAH PAFNPGFDLA VQPPQMINNT FDPIARFSRN HWRHRHPTVA  300
PP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.11e-105NAC family protein