PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021288209.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 360aa MW: 39334 Da PI: 7.9537

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021288209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.4	9.1e-56	14	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_021288209.1 14 LPPGFRFHPTDEELITYYLLKKVLDSSFTG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSS 107 79***********************999.89***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_021288209.1 108 kTCALVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 142 45567**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MDSYHHFDNG DTHLPPGFRF HPTDEELITY YLLKKVLDSS FTGRAIAEVD LNKCEPWELP 60 EKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKTC ALVGMKKTLV 120 FYRGRAPKGE KSNWVMHEYR LEGKFAYHYL SRSSKDEWVI SRVFQKSGSG SGATSSTGGG 180 AKKTRTNASV ALYQEPSSPS SVSLPPLLDP TTAATATTAT SLTDRDSCSY DSHSQPEHVS 240 CFSTIAAAAA SAAATTPAAH PAFNPGFDLA VQPPQMINNT FDPIARFSRN VGVSAFPSLR 300 SLQENLHLPF FFSPPALAAP PPHSGSSLNW GAVSEEGNGG SGAGGKMSMG HTELDCMWTF

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MDSYHHFDNG DTHLPPGFRF HPTDEELITY YLLKKVLDSS FTGRAIAEVD LNKCEPWELP  60
EKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKTC ALVGMKKTLV  120
FYRGRAPKGE KSNWVMHEYR LEGKFAYHYL SRSSKDEWVI SRVFQKSGSG SGATSSTGGG  180
AKKTRTNASV ALYQEPSSPS SVSLPPLLDP TTAATATTAT SLTDRDSCSY DSHSQPEHVS  240
CFSTIAAAAA SAAATTPAAH PAFNPGFDLA VQPPQMINNT FDPIARFSRN VGVSAFPSLR  300
SLQENLHLPF FFSPPALAAP PPHSGSSLNW GAVSEEGNGG SGAGGKMSMG HTELDCMWTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-106	NAC family protein