PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021287951.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 261aa MW: 29752 Da PI: 4.7801 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.7 | 3.7e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l +++++G +W+ ++ g++R++k+c++rw +yl XP_021287951.1 14 KGAWSAEEDDKLRSYIQRYGHWNWRELPKFAGLKRCGKSCRLRWMNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 58.1 | 2e-18 | 68 | 112 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+ T+eEd l+ +++++lG++ W+tIa++++ gRt++++k++w+++l XP_021287951.1 68 GNYTEEEDALIMKLHEELGNR-WSTIAARLP-GRTDNDIKNHWHTHL 112 789******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MVRAPFYDKN GMKKGAWSAE EDDKLRSYIQ RYGHWNWREL PKFAGLKRCG KSCRLRWMNY 60 LRPQVKQGNY TEEEDALIMK LHEELGNRWS TIAARLPGRT DNDIKNHWHT HLKKRAKRNP 120 ITSDGKEYAS TTSQTEATHN SDGEGESIII DTLPGMIIES SPLSPTTSSS TELSSFSSES 180 GFISSLSIGA TEDICLPSSE IYEDQSSGDF WSEPFVADNI YNQDGYPSSL ARGEFELPLP 240 DDMYFDESAD WLYQVLMHEL P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 4e-57 | MYB family protein |