PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021287732.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 342aa MW: 38315.7 Da PI: 8.9415

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021287732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.3	5.1e-52	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeel+v+yL++kv+g++++l ++i e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ XP_021287732.1 14 LPPGFRFYPTDEELLVQYLCRKVAGHHFSL-QIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITT- 106 79*************************9.89***********7777799*********************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++vg+kk Lvfy g+apkg+kt+W+mheyrl XP_021287732.1 107 EGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRL 139 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGVPETDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGHH FSLQIIGEID LYKFDPWVLP 60 SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRK VGIKKALVFY 120 IGKAPKGTKT NWIMHEYRLI EASRRNGSTK LDEWVLCRIY KKNSSAQKPL PNVSSKEHSN 180 NGSSSSSSSQ LDDMLESFPE LDGRFFALPR MNSLKTLQND EKTGFHNLGS GNLDWASLAG 240 LNSVPELVPS GTQTQSQGIP SYGNNDVYXP TMQPTLCQMD TSTNKIGNSA DEEVQSGLRT 300 QRADNSGFFQ HNSSVLTQNF SNPIDPYGFR YPTHPLGFGF RQ

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGVPETDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGHH FSLQIIGEID LYKFDPWVLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRK VGIKKALVFY  120
IGKAPKGTKT NWIMHEYRLI EASRRNGSTK LDEWVLCRIY KKNSSAQKPL PNVSSKEHSN  180
NGSSSSSSSQ LDDMLESFPE LDGRFFALPR MNSLKTLQND EKTGFHNLGS GNLDWASLAG  240
LNSVPELVPS GTQTQSQGIP SYGNNDVYXP TMQPTLCQMD TSTNKIGNSA DEEVQSGLRT  300
QRADNSGFFQ HNSSVLTQNF SNPIDPYGFR YPTHPLGFGF RQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-135	NAC family protein