PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287494.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 231aa    MW: 24565.4 Da    PI: 4.8821
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.6e-1675122355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  XP_021287494.1  75 YRGIR-CR-SGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 122
                     9***9.55.6*********843...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MADPNNPTNV PQLDQPCSHS PVPSSSLQDP NIQVPHPLPT STHTCDNPSP TCDKFPPIAP  60
KSNMASSSSG KHPMYRGIRC RSGKWVSEIR EPRKTTRIWL GTYPTPEMAA AAYDVAALAL  120
KGGEAAVNFP GSVASYPLPA SASSADIRKA AAAAALLKKA ETTSEINLGT GHQAKNEEMT  180
TQEYVDEDAL LNLPNLLVDM AEGLLVSPPR ISSTPSDDSP ENSDGESLWS Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-42ERF family protein