PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287252.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 328aa    MW: 37728.6 Da    PI: 6.3735
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.71.4e-20227317498
                     E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     +l ps+v k  +l +p+ fa++h +g+  +  t+tl+ ++g++W v++     +g+  + kGW eFv +n+L+egD++vF+l++++e  l+v++f
  XP_021287252.1 227 ILRPSYVYKGILLHIPRWFARKHlNGV--N-GTITLQVSEGKKWPVRC--IHVDGHLKFCKGWAEFVLDNNLDEGDVCVFELISTQEIVLKVTIF 316
                     5789*******************8666..2.38***************..6666778899***********************999999999999 PP

                     - CS
              B3  98 r 98 
                     r
  XP_021287252.1 317 R 317
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MKDRRRMWFD SGWNVFLEYY SICVGYFLVF RYEGNSHFNV HVYNLAASEI NYLSNGLNNS  60
EEPSPDEHVK NIEDGDLAQI MGSCPKCSSS YFLTDKDSDE CLDHDRKKHK NTTCGADLKN  120
LHQKNDMRDL QATFQLTQGK GTQLNVVELT SPADEGGPYF LNETHRITRK IKQETEPNID  180
EQEEELPAVN TPRNIARRWR DVTTEEKQSA FHAAATFKPD NPFCRIILRP SYVYKGILLH  240
IPRWFARKHL NGVNGTITLQ VSEGKKWPVR CIHVDGHLKF CKGWAEFVLD NNLDEGDVCV  300
FELISTQEIV LKVTIFRVLE DAGPVNKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-64B3 family protein