PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287220.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 286aa    MW: 31972.3 Da    PI: 5.9925
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.3e-17170221256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrdps   k  r++lg+f +  +Aaka++ a+ k++g+
  XP_021287220.1 170 HYRGVRRRP-WGKFAAEIRDPSR--KGSRVWLGTFESDVDAAKAYDCAAFKMRGH 221
                     7********.**********854..34**********99**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MLSLPALWTK PKTNNKFQTS PTLESKGCQF PGPLPMWGKH ERFLPHINIS LPLPTSSAFI  60
NPLYSEKMGT IEESTTLEFI RQHLLGDFAS ADAFISSLDF GLSQLQPSIK PENPIPELEH  120
DSPISDPNNQ ILEIFSCNVK PEVMDLESPS SIISGSNLEP KVSPCEERRH YRGVRRRPWG  180
KFAAEIRDPS RKGSRVWLGT FESDVDAAKA YDCAAFKMRG HKAILNFPLE AGEAGPPAST  240
GRKRRRVKGI KLPECDVMSP ESIELAWEVK EEEGELDYQN PTVTVN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1242246RKRRR
2243247KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.13e-47ERF family protein