PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021287177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 228aa MW: 25822.2 Da PI: 8.3364 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 77.6 | 1.6e-24 | 33 | 84 | 2 | 58 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 e++rYkeC++NhAas G +++DGCgEf+ + +a+ CaACgCHR+FHR+e+ XP_021287177.1 33 ERIRYKECRRNHAASFGRYVFDGCGEFIGC-----NDDAFMCAACGCHRSFHRKEPP 84 679*************************98.....5689***************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 228 aa Download sequence |
MAGEASKDVI KIEASEIEPI SVQRCSSPVP ETERIRYKEC RRNHAASFGR YVFDGCGEFI 60 GCNDDAFMCA ACGCHRSFHR KEPPNNFNNA ALPPPHQPTP PQRPLLSPLP LASHNGLTGE 120 TTLFPRDRNI DAGSETLSGA EVEEPKDTKK RAKRTRITME QKTKMMRFAD KLGWRPQKHD 180 DAEVQQFCEE VGITKRVFVV WLNNNRRRKD SMRSEEQACV HAVAENNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24660.1 | 2e-32 | ZF-HD family protein |