PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021287110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 26116.9 Da PI: 8.2146 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.8 | 4.3e-16 | 55 | 104 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +grWvAeI+d s ++ r +lg+f+ aeeAa a++ a++ l+g XP_021287110.1 55 RYLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDSAARLLRG 104 689******.7*********42...36***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MDSMDSSRTI PSHQSQSPCK NHISIPLETE SFHEDSEKRG KKLTKRGNND NTGRRYLGVR 60 QRPSGRWVAE IKDSSQKLRL WLGTFDRAEE AALAYDSAAR LLRGRNAKTN FQYHGVMNTY 120 EENCNLLGKN PRLYQLLQLT ITKNHARSTS LKSIGTVPWQ NQNVGNKVDP VDFDTLVEET 180 IFCSSTSDHD EGSNNKLSQL SLGSSKVYSS VVVAPSFCTS LDQGGEEGKN CQDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-16 | ERF family protein |