PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021286912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 271aa MW: 30529.1 Da PI: 5.2307 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.9 | 4.2e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ + +G +W+++++ g++R++k+c++rw +yl XP_021286912.1 14 KGPWTAEEDKKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 1e-16 | 71 | 111 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ XP_021286912.1 71 NEDEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 589***************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MGRQPCCDKL GVKKGPWTAE EDKKLVNFIL THGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL NEDEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLIKMG 120 IDPVTHEPLQ KPAATPQDAT CQENGRPNLD PNQLELPKNS GHVFPSTDES STPIENSSTE 180 ESRSSSESGS DDDPLMNLIW SESFLNDLSW NFPGPDSREE YSELGFSSSS EENSLSWLLD 240 YPNIGDDLHQ SFGIGGFSEI DMNCLDMGGK Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22680.1 | 2e-86 | MYB family protein |