PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021286910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 89aa MW: 9956.26 Da PI: 4.725 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.2 | 1.1e-06 | 18 | 56 | 17 | 55 |
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +L++llP++ + ++++ s ++L +++ YI++Lq XP_021286910.1 18 SALILNLQTLLPQPNRCRNGRESATQVLSETCSYIRKLQ 56 556889*******8899*********************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 89 aa Download sequence |
MSSQGSRASN KITDDELSAL ILNLQTLLPQ PNRCRNGRES ATQVLSETCS YIRKLQAEID 60 DLSERLSQCL GSMDMTSLDA EILRNLLRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G47710.1 | 2e-21 | bHLH family protein |