PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286754.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 89aa    MW: 9642.79 Da    PI: 8.3808
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286754.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.51.6e-332379360
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                    +vrY eC+kNhAa++Gg+avDGC+Efm+s geegt+ al CaACgCHRnFHRreve+e
  XP_021286754.1 23 NVRYGECQKNHAANIGGYAVDGCREFMAS-GEEGTTGALACAACGCHRNFHRREVETE 79
                    79**************************9.999*********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MKKRQVVLKS GRSSSTSSSV IRNVRYGECQ KNHAANIGGY AVDGCREFMA SGEEGTTGAL  60
ACAACGCHRN FHRREVETEV VCEYTPPNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.12e-32ZF-HD family protein