PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021286729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 189aa MW: 21904.8 Da PI: 8.8208 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62.7 | 7.4e-20 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l++++k +G ++WktIa + g+ R++k+c++rw++yl XP_021286729.1 15 KGAWTAEEDRKLAEYIKIHGAKRWKTIAIKAGLSRCGKSCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.1 | 7.5e-17 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_021286729.1 68 RGNISDEEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MAPKKDGVSK RVLNKGAWTA EEDRKLAEYI KIHGAKRWKT IAIKAGLSRC GKSCRLRWLN 60 YLRPNIKRGN ISDEEEDLIL RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKINQK 120 EKTEQTSTSE QTVPLKTWET VQMEAEVAKG SDENFELSFD ANEFFDFSTQ DCFGLDWVNK 180 FLELDDQTP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 6e-54 | MYB family protein |