PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021286549.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 361aa MW: 41667.4 Da PI: 6.3458

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021286549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.9	6.5e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ ++ a e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_021286549.1 7 VPPGFRFHPTDEELVDYYLRKKITSRRIDL-DVIKDVDLYKIEPWDLQElcRIGAeEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 100 69**************************.9***********954555442556******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_021286549.1 101 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MNTFTQVPPG FRFHPTDEEL VDYYLRKKIT SRRIDLDVIK DVDLYKIEPW DLQELCRIGA 60 EEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRIAT IRKVSEHESP CWYDDQVSFI 180 PDLDSPKQTS HSNMAYHIPY SCKKELDLQY QVPHEHYLQL PLLESPKLLQ TPAGAVSGNS 240 MAAYGLDMNN ASTLQSSTLT QEDHIQQTHD QQHLHALYGN SSNEQAVDQL TDWRALDKFV 300 ASQLSQEDVA RENNYSSASA ANNVFHSSEQ TNLLIRHLNR QEMVPENAST STSSCQIDLW 360 K

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MNTFTQVPPG FRFHPTDEEL VDYYLRKKIT SRRIDLDVIK DVDLYKIEPW DLQELCRIGA  60
EEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRIAT IRKVSEHESP CWYDDQVSFI  180
PDLDSPKQTS HSNMAYHIPY SCKKELDLQY QVPHEHYLQL PLLESPKLLQ TPAGAVSGNS  240
MAAYGLDMNN ASTLQSSTLT QEDHIQQTHD QQHLHALYGN SSNEQAVDQL TDWRALDKFV  300
ASQLSQEDVA RENNYSSASA ANNVFHSSEQ TNLLIRHLNR QEMVPENAST STSSCQIDLW  360
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-127	NAC family protein