PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021286532.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 591aa MW: 64119.7 Da PI: 6.718

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021286532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.7	3.4e-10	433	490	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ + l+++ XP_021286532.1 433 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 490 9********************************************9998877666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MGDSEEGNTD VMQRIQSSFG TSSSSIPKQP LSMNHLEIPQ LNPNQIRAAR HFSHFGQNFN 60 GGVGDAANKR VGIPPSHPNQ IPPISPYSQI PVSRQMNQQM GSQSFSPGPT HSRSLSQPSS 120 FFSLDSLPPL SPSPFRDSSS VVVPDQICTD VSMEDRDAAS HSLLPPSPFS RGNSPRVGES 180 LPPRKSHRRS NSDIPFGFNT IMQSSPPLIP LRGSGGLERS VSGKENLGVP KPAQLVKKET 240 TWERGADGNA EGMGERKSEG EVVDDLFSAY MNLDNIDALN SSGTDDKNNG TENHEDLDSR 300 ASGTKTNGGD SSDNEAESSV NESGNSAPRG GMNSTDKREG IKRSAGGDIA PTGRHYRSVS 360 MDSFMGKLNF GDESPKLPPS PGTRPGQLSP SNSIDGNSAA FSLEFGNGEF SGAELKKIMA 420 NEKLAEIAMS DPKRAKRILA NRQSAARSKE RKMRYISELE HKVQTLQTEA TTLSAQLTLL 480 QRDSVGLTNQ NNELKFRLQA MEQQAQLRDA LNEALTAEVR RLKLATQELG GDSDPSKGMV 540 SQQLSVNHQM FQLHQQQSSQ LNIPHQFQQQ QLPPQPQQQN GNTTAKTESN Q

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MGDSEEGNTD VMQRIQSSFG TSSSSIPKQP LSMNHLEIPQ LNPNQIRAAR HFSHFGQNFN  60
GGVGDAANKR VGIPPSHPNQ IPPISPYSQI PVSRQMNQQM GSQSFSPGPT HSRSLSQPSS  120
FFSLDSLPPL SPSPFRDSSS VVVPDQICTD VSMEDRDAAS HSLLPPSPFS RGNSPRVGES  180
LPPRKSHRRS NSDIPFGFNT IMQSSPPLIP LRGSGGLERS VSGKENLGVP KPAQLVKKET  240
TWERGADGNA EGMGERKSEG EVVDDLFSAY MNLDNIDALN SSGTDDKNNG TENHEDLDSR  300
ASGTKTNGGD SSDNEAESSV NESGNSAPRG GMNSTDKREG IKRSAGGDIA PTGRHYRSVS  360
MDSFMGKLNF GDESPKLPPS PGTRPGQLSP SNSIDGNSAA FSLEFGNGEF SGAELKKIMA  420
NEKLAEIAMS DPKRAKRILA NRQSAARSKE RKMRYISELE HKVQTLQTEA TTLSAQLTLL  480
QRDSVGLTNQ NNELKFRLQA MEQQAQLRDA LNEALTAEVR RLKLATQELG GDSDPSKGMV  540
SQQLSVNHQM FQLHQQQSSQ LNIPHQFQQQ QLPPQPQQQN GNTTAKTESN Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-155	bZIP family protein