PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021286448.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | B3 | ||||||||
Protein Properties | Length: 117aa MW: 13671 Da PI: 10.8993 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 45.6 | 1.3e-14 | 4 | 91 | 1 | 87 |
EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-.SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkld.gr 87 f+k ltp d k+ l +p + + + g+ s++l+++d+s r W++++++rkk+ v+++GW eFv++n+L+ gD v +l+ g+ XP_021286448.1 4 FIKRLTPTDIDKR--LAIPTNSLVYFpgfRGN--HSVDLKVKDKSHRLWTFRCSIRKKRYLkPVFSSGWLEFVRSNNLRIGDKVSVRLEqGH 91 7888888777765..9*****99666966444..799****************77555543699********************99987333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MELFIKRLTP TDIDKRLAIP TNSLVYFPGF RGNHSVDLKV KDKSHRLWTF RCSIRKKRYL 60 KPVFSSGWLE FVRSNNLRIG DKVSVRLEQG HVSGVEYGIE VQRKIRLLGK DVWADVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13260.1 | 4e-08 | RAV family protein |