PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021286179.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 348aa MW: 39117.1 Da PI: 8.0508 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.9 | 2e-09 | 179 | 226 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_021286179.1 179 SHSLAERVRREKISERMKILQRLVPGC----DKVTGKALMLDEIINYVQSLQ 226 8*************************9....555*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MAAFSFQPHP FLLDSIFLPN TPTKISGFME EGNINSNCFS QVYPPEPIQE SPFDPKFHES 60 SCLDHSSKIV YSDNEPSVTK KQSTDDSTVV DKLESGEQVT QNVTLTDRKR KTRNRTALNS 120 AQSKDAKEGK SKKQRKCNDA LKNEKKEPKA DKKDQKKATE EPPTGYIHVR ARRGQATDSH 180 SLAERVRREK ISERMKILQR LVPGCDKVTG KALMLDEIIN YVQSLQNQVE FLSMKLASVN 240 PMFYDFGVDL EALLVRPERV NGSIASPLPS LQQCNPTQPT AFPYTTTTAF VPANNYPLLD 300 TSAALLLQQG QRPNVFSQDN GSLLWDVEDQ RQKFLNSSGL NDNLCCFH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 108 | 149 | RKRKTRNRTALNSAQSKDAKEGKSKKQRKCNDALKNEKKEPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 5e-59 | bHLH family protein |