PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286149.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 252aa    MW: 28941.9 Da    PI: 9.6841
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286149.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.83.2e-47141371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF+Ptdeelv +yLk kv + +l++ ++i+e+++++++PwdLp    ++e+e +fFs+++ ky+ g+r nrat+sgyWkatg dk+++s+
  XP_021286149.1  14 LPPGFRFQPTDEELVFQYLKCKVFSFPLPA-SIIPEINVCNYDPWDLP---GESEQERFFFSSKEAKYRIGNRINRATASGYWKATGLDKQITSR 104
                     79****************************.89***************...3467899************************************* PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +  g++ktLvf+ g+ p+g++tdW+mheyrl
  XP_021286149.1 105 RYQIAGMRKTLVFHMGKPPHGSRTDWIMHEYRL 137
                     *******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MNKLNFVREG VTKLPPGFRF QPTDEELVFQ YLKCKVFSFP LPASIIPEIN VCNYDPWDLP  60
GESEQERFFF SSKEAKYRIG NRINRATASG YWKATGLDKQ ITSRRYQIAG MRKTLVFHMG  120
KPPHGSRTDW IMHEYRLVTV ASKDCNSPLA KNPIIQNFLN HHMEKWVVCR IFVKKRSKRS  180
EDEIIQSFCN NNHEDKKSMA VPHEPKFFYF MREKSGITPA SSSSSSSSSS SITEISSSGA  240
DLEESSSHNI VR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-73NAC family protein