PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286001.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 270aa    MW: 30181.1 Da    PI: 7.9333
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-20103153255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta eAaka+++a+ kl+g
  XP_021286001.1 103 HYRGVRRRP-WGKFAAEIRDP---NrKGARVWLGTFDTAIEAAKAYDRAAFKLRG 153
                     7********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MASPEETSAL ELIRQHLLTD FASMENFLSN LDNCTSRVSA TNQIPQSVDT KVPKVPQINS  60
PNQLKQSTLS QRRPSINLEI PPAKVNICSN PAPVESDSNE KRHYRGVRRR PWGKFAAEIR  120
DPNRKGARVW LGTFDTAIEA AKAYDRAAFK LRGSKAILNF PLEAGKSNCA EPELTEDSSS  180
RKRRREKEEN EEEESVTSKG VKREEVMEEK VVMPVTKDTV TVTETATPGI CLTPSNWTGF  240
WDSEDMKGIF SIPPLSPLSP QFGYSRLAVM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181185RKRRR
2181187RKRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-54ERF family protein