PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021285951.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 353aa MW: 39970.3 Da PI: 8.5408

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021285951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.2	1.3e-56	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv + ++++ ++i evd++k+ePw+Lp k+k +ekewyfF+ rd+ky+tg r+nrat+sgyWkatgkdke+++ XP_021285951.1 16 LPPGFRFHPTDEELISHYLYKKVLDINFSA-RAIGEVDLNKSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATESGYWKATGKDKEIYR- 108 79************************99.89***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkgekt+Wvmheyrle XP_021285951.1 109 GKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 142 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MANITVIGQE DDQMDLPPGF RFHPTDEELI SHYLYKKVLD INFSARAIGE VDLNKSEPWE 60 LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATESGYWKAT GKDKEIYRGK SLVGMKKTLV 120 FYKGRAPKGE KTNWVMHEYR LEGKYSVHNL PKTAKNEWVI CRVFQKSSGG KKTHISGLVR 180 VGSFGNELGP SGLPPLMESS PYNGKSKPVV ESAYVPCFSN PIDVQGNQQD TTDNFNNPLL 240 PVSSNPTDIF PRIPLSNAFY STQAVPFPSN FQFPGSVLMQ DQSILKALIK NHGSNMRQGF 300 KTEREMVSVS QETGLTTDIN AEISSVVSNL EMGKRPFDDR EAPSVDLDCF WHY

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MANITVIGQE DDQMDLPPGF RFHPTDEELI SHYLYKKVLD INFSARAIGE VDLNKSEPWE  60
LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATESGYWKAT GKDKEIYRGK SLVGMKKTLV  120
FYKGRAPKGE KTNWVMHEYR LEGKYSVHNL PKTAKNEWVI CRVFQKSSGG KKTHISGLVR  180
VGSFGNELGP SGLPPLMESS PYNGKSKPVV ESAYVPCFSN PIDVQGNQQD TTDNFNNPLL  240
PVSSNPTDIF PRIPLSNAFY STQAVPFPSN FQFPGSVLMQ DQSILKALIK NHGSNMRQGF  300
KTEREMVSVS QETGLTTDIN AEISSVVSNL EMGKRPFDDR EAPSVDLDCF WHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-166	NAC family protein