PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021285849.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 371aa MW: 41669.8 Da PI: 7.1036 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.2 | 3.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l +++++G g+W++ +++ g+ R++k+c++rw +yl XP_021285849.1 14 RGPWTPEEDQKLMAYIQKHGHGSWRSLPEKAGLQRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.2e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ +E++ +++++++lG++ W++Ia++++ +Rt++++k++w+++ XP_021285849.1 67 RGKFSLDEEKTIIQLHALLGNR-WSAIASHLP-KRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MGRSPCYDAT GLKRGPWTPE EDQKLMAYIQ KHGHGSWRSL PEKAGLQRCG KSCRLRWINY 60 LRPDIKRGKF SLDEEKTIIQ LHALLGNRWS AIASHLPKRT DNEIKNYWNT HIKKRLAMMG 120 IDPATHKPVV AALGSGNGEP KKVTNLTHMA QWESARLEAE ARLVRESSKL RQNYQQPTAG 180 LPCPPPTQRV NKIASRLGSP RCLDILKAWQ RVQLKSLVIE NNGGDHGGNL QSPTSTSNLQ 240 NIPVSSTNCN IATFHSIDVN EGFTTFQDME FEAGQAWSMG ACDAEDDDMI KGFSNFLSNN 300 WETDHLVQYP NTDKDGNSGS SDGVSENDDE NKNYLDDVFN LVDCGLRYSD STLLHNNICM 360 EHLELFIRPT C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 1e-100 | MYB family protein |