PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021285670.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

DBB

Protein Properties

Length: 216aa MW: 23870.1 Da PI: 6.7512

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021285670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.8	9e-08	3	33	4	34
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeH 34 ++C+ +e+ ++lfC ++ lC++C ++ H XP_021285670.1 3 TVCDVCESAAAILFCAADEAALCRSCDEKVH 33 58**************************998 PP
2	zf-B_box	28.5	3.3e-09	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C + H g H XP_021285670.1 52 DVPRCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtH 91 5799**************************9995544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MRTVCDVCES AAAILFCAAD EAALCRSCDE KVHMCNKLAS RHVRVGLADP SDVPRCDICE 60 NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDKPGR LDELGLQTLD 120 RNEVRKDKNQ QQPKLAAREN QQNHRGSPVP VLDGSSDGDG KGNKLIDLNA KPQRAHGQAS 180 TNQAWIFRVA IIMTLQAWSR LDPSKESLIS ELDVAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G21320.1	2e-75	DBB family protein