PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021285514.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 905aa MW: 102370 Da PI: 6.1765

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021285514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	73.1	3.5e-23	658	716	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+Wr YG K++kg+++ + Y+C+++gCp++k+v r+++d++++++tYeg Hnhe XP_021285514.1 658 VDDGYKWRNYGTKTIKGNPHRSNHYKCSTSGCPMRKRVVRDSQDTSFLVVTYEGIHNHE 716 59********************************************************7 PP
2	G2-like	89.1	4.1e-28	790	842	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr +Wt eLH+rFv++v++L G+++A+Pk+i++lm+v+gLt+e+v+SHLQkYRl XP_021285514.1 790 PRSVWTVELHRRFVDVVDHL-GIQNAVPKRIMQLMNVEGLTRENVASHLQKYRL 842 89****************.9*****************************8 PP
3	Myb_DNA-binding	40.4	7e-13	791	841	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT e++ ++vd+v lG +k+I++ m+ +g+t++++ s++qky+ XP_021285514.1 791 RSVWTVELHRRFVDVVDHLGIQnaVPKRIMQLMNvEGLTRENVASHLQKYR 841 678****************999************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 905 aa Download sequence
MQQSVLKQSG SGLTQIRKEE EWAGKGVLFM NDDKVSELPP SPNCPSLIVL YLQGNYELTA 60 IPPLFFQRMA FLQVLDLSHT SIKCLPKSLP KLVALKKLLL RRCQLFMELS PQVAKLSNLE 120 ELDLDETQIM DLPKETGKLL KLRRLRVSFY QICGKKKSKY SNVVIHPETI SNLSQLTELS 180 IDVNPTDKRW DDSVGAVVKE VCNSETLTTL SLYLPKFQLL DSISSLYPSL SGFRFIVGHH 240 KRRIISRVPH EVEAEYRNWD KCLKFVNGEN IPIEIKGVLK YSTSFFLDHH GTAMNLSEFG 300 TENMKRLKFC LLVDCNKMET IIDGERHYEG NEDDPSESDP SPVENVLESL EYLNIYYMEN 360 LGSIWRGPNC YGCMSKLKFL ALHTCPLLIN IFSHTLLGNF VNLEEFILED CPLVTSLVSH 420 ASVKPMMSDK FLPSLKRLLL LYLPELVSIS NGLLIAPKLE TIGFYNCPKL KSISKMELSS 480 KTLKIIKAEL QWWEDMKWNE AEWGNRPDYL MRIFSPIDKE KDVMTQLAED RDLFEVTMQN 540 EGQQLGNCGS SPSDYTEERI TETDVTKSTS SVCMLPSTPW TEAPKQAWNF SSDENKRVED 600 DYLDLASETS EVDDDEDEPK AKRWNCTENE NKGVIGFASE IARRDRTEFR IKSNVDKVDD 660 GYKWRNYGTK TIKGNPHRSN HYKCSTSGCP MRKRVVRDSQ DTSFLVVTYE GIHNHEGPSV 720 KVLNNVEDAA EAAKTISPTK GYADALEASI QDKGLHPGIP EASGPDESQQ SAVTMAENSD 780 NPSARTLKQP RSVWTVELHR RFVDVVDHLG IQNAVPKRIM QLMNVEGLTR ENVASHLQKY 840 RLYLRRMRGL SNEGPSSWIS WFAPVLVQRS LHESGSGGGE GSGVGGGSAN GNGIWGWLYQ 900 CLMGH

Sequence ? help Back to Top

Protein Sequence Length: 905 aa Download sequence

MQQSVLKQSG SGLTQIRKEE EWAGKGVLFM NDDKVSELPP SPNCPSLIVL YLQGNYELTA  60
IPPLFFQRMA FLQVLDLSHT SIKCLPKSLP KLVALKKLLL RRCQLFMELS PQVAKLSNLE  120
ELDLDETQIM DLPKETGKLL KLRRLRVSFY QICGKKKSKY SNVVIHPETI SNLSQLTELS  180
IDVNPTDKRW DDSVGAVVKE VCNSETLTTL SLYLPKFQLL DSISSLYPSL SGFRFIVGHH  240
KRRIISRVPH EVEAEYRNWD KCLKFVNGEN IPIEIKGVLK YSTSFFLDHH GTAMNLSEFG  300
TENMKRLKFC LLVDCNKMET IIDGERHYEG NEDDPSESDP SPVENVLESL EYLNIYYMEN  360
LGSIWRGPNC YGCMSKLKFL ALHTCPLLIN IFSHTLLGNF VNLEEFILED CPLVTSLVSH  420
ASVKPMMSDK FLPSLKRLLL LYLPELVSIS NGLLIAPKLE TIGFYNCPKL KSISKMELSS  480
KTLKIIKAEL QWWEDMKWNE AEWGNRPDYL MRIFSPIDKE KDVMTQLAED RDLFEVTMQN  540
EGQQLGNCGS SPSDYTEERI TETDVTKSTS SVCMLPSTPW TEAPKQAWNF SSDENKRVED  600
DYLDLASETS EVDDDEDEPK AKRWNCTENE NKGVIGFASE IARRDRTEFR IKSNVDKVDD  660
GYKWRNYGTK TIKGNPHRSN HYKCSTSGCP MRKRVVRDSQ DTSFLVVTYE GIHNHEGPSV  720
KVLNNVEDAA EAAKTISPTK GYADALEASI QDKGLHPGIP EASGPDESQQ SAVTMAENSD  780
NPSARTLKQP RSVWTVELHR RFVDVVDHLG IQNAVPKRIM QLMNVEGLTR ENVASHLQKY  840
RLYLRRMRGL SNEGPSSWIS WFAPVLVQRS LHESGSGGGE GSGVGGGSAN GNGIWGWLYQ  900
CLMGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.2	2e-36	G2-like family protein