PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021285483.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 24460.9 Da PI: 10.0199 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.3 | 1.3e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCda+va+i+fs++gkl+eys+ XP_021285483.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDADVALIVFSTKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 105.5 | 6.4e-35 | 83 | 174 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e ++ s++ e+akLk+++e Lqr+qRh++Ge+L++Lsl+eLq+LeqqLe++lk++Rs+Kn+l++e+i+elqkk k+lqe+n++L kk++e XP_021285483.1 83 NEVDQNGSWTLEHAKLKARMEVLQRNQRHFMGEELDNLSLRELQNLEQQLESALKHVRSRKNQLMFESISELQKKDKALQEQNNMLAKKVKE 174 56667899*********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD ADVALIVFST KGKLFEYSTD 60 ACMERILERY ERYSFADRQL DANEVDQNGS WTLEHAKLKA RMEVLQRNQR HFMGEELDNL 120 SLRELQNLEQ QLESALKHVR SRKNQLMFES ISELQKKDKA LQEQNNMLAK KVKEKEKAVA 180 QQAQWEQQNN CQDTSAIPLP QPMRSSNIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 2e-84 | MIKC_MADS family protein |