PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021285390.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 366aa MW: 40249.7 Da PI: 4.6128

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021285390.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	22.9	2.4e-07	12	116	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 + F+ tdee + k ++g++l+ +vi+e + yk+ P+ +p ++ w+ s++d+ +++g+W ++ + + v+s ++ XP_021285390.1 12 IDFNCTDEEFF-IWFSKLTSGSPLPS-NVIDE-NPYKYPPQYIP------KNIWFLISSNDSI---------DVEHGFWTTKQEARVVFS-NSDI 87 67999999998.67788888888888.65655.89999999999......2345555554443.........4689***9999999999.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g k++ +y+g+ p kt+ vm+ +++ XP_021285390.1 88 IGWKTIHEYYEGHVPYECKTEYVMQVFSI 116 ************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MATPAASPPA NIDFNCTDEE FFIWFSKLTS GSPLPSNVID ENPYKYPPQY IPKNIWFLIS 60 SNDSIDVEHG FWTTKQEARV VFSNSDIIGW KTIHEYYEGH VPYECKTEYV MQVFSITQKI 120 LSDDNEKKEK SSMCRVSLFH EMQQTVSSAG VEAERNRLAQ PPVLDANSST RIASLSNPEV 180 NKHDAVAGRL PVPEHHGENI NEMDSFPGGQ IDEFLRENFL ELDDLDSPAS PSSSSDNSSA 240 LSLSSGECFD AVALLQDIED QVIEQKEEGK KLNVTASNKL DEVVIVPATL GSVVSVEESN 300 SGSDESFKTT GSVPISASKH AKGDQRGEGP SSSSDNRMAA SAGGRKRAAF GGMKKLRKKY 360 LCFMPF

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MATPAASPPA NIDFNCTDEE FFIWFSKLTS GSPLPSNVID ENPYKYPPQY IPKNIWFLIS  60
SNDSIDVEHG FWTTKQEARV VFSNSDIIGW KTIHEYYEGH VPYECKTEYV MQVFSITQKI  120
LSDDNEKKEK SSMCRVSLFH EMQQTVSSAG VEAERNRLAQ PPVLDANSST RIASLSNPEV  180
NKHDAVAGRL PVPEHHGENI NEMDSFPGGQ IDEFLRENFL ELDDLDSPAS PSSSSDNSSA  240
LSLSSGECFD AVALLQDIED QVIEQKEEGK KLNVTASNKL DEVVIVPATL GSVVSVEESN  300
SGSDESFKTT GSVPISASKH AKGDQRGEGP SSSSDNRMAA SAGGRKRAAF GGMKKLRKKY  360
LCFMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-08	NAC family protein