PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021285385.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 460aa MW: 51184.5 Da PI: 6.12

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021285385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.5	6.3e-10	381	418	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt++qV++WF N R + XP_021285385.1 381 FEHflHPYPTDSEKLMLASQTGLTKNQVSNWFINARVR 418 554459******************************88 PP
2	BELL	106	2.4e-34	243	314	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++elq++ akL+ lleeV+ rY++y++q++ v+ssFea ag+gsak Yt+lAl+a+SrhF +L+dai++qi XP_021285385.1 243 EKHELQIRLAKLIGLLEEVEIRYEKYYQQMEEVVSSFEALAGVGSAKTYTALALQAMSRHFGSLRDAIISQI 314 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MVSRDSPPNP ASSMLHHFII SDSINSQNQF EGQHFGAYGS ALRGNHHNTF PQSLALLPSI 60 QSLGERMSRS MDLLPAPIVA EESEISQTRH LMDLLGAANE TNHQTQRLSL SLGSHMLGPS 120 LNSNIASSSY LLSGAEDREV CNPGVENISD DYSFTASTFA SASTSLHRSC PTAYGPESFG 180 TVIGNSRYLR PAQSLLDEVV NVGSKNVEDH FFGKLYLGDR GVGSRLSSEL KAEFCSNEIS 240 LPEKHELQIR LAKLIGLLEE VEIRYEKYYQ QMEEVVSSFE ALAGVGSAKT YTALALQAMS 300 RHFGSLRDAI ISQINVIRRK FSHDLPKINR GLSQLSLFDR DSRQNRLSLQ QLGMIPSQRQ 360 AWRPIRGLPE TSVAILRSWL FEHFLHPYPT DSEKLMLASQ TGLTKNQVSN WFINARVRLW 420 KPMIEEMYKE EFADSPQDSD PSLASCSMGR EGIATDQAED

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MVSRDSPPNP ASSMLHHFII SDSINSQNQF EGQHFGAYGS ALRGNHHNTF PQSLALLPSI  60
QSLGERMSRS MDLLPAPIVA EESEISQTRH LMDLLGAANE TNHQTQRLSL SLGSHMLGPS  120
LNSNIASSSY LLSGAEDREV CNPGVENISD DYSFTASTFA SASTSLHRSC PTAYGPESFG  180
TVIGNSRYLR PAQSLLDEVV NVGSKNVEDH FFGKLYLGDR GVGSRLSSEL KAEFCSNEIS  240
LPEKHELQIR LAKLIGLLEE VEIRYEKYYQ QMEEVVSSFE ALAGVGSAKT YTALALQAMS  300
RHFGSLRDAI ISQINVIRRK FSHDLPKINR GLSQLSLFDR DSRQNRLSLQ QLGMIPSQRQ  360
AWRPIRGLPE TSVAILRSWL FEHFLHPYPT DSEKLMLASQ TGLTKNQVSN WFINARVRLW  420
KPMIEEMYKE EFADSPQDSD PSLASCSMGR EGIATDQAED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-108	TALE family protein