PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021285382.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 684aa MW: 75407.8 Da PI: 6.276

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021285382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	431	468	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LAk++gLt +qV +WF N R + XP_021285382.1 431 FEHflHPYPKDSEKIMLAKQTGLTRNQVANWFINARVR 468 664459******************************88 PP
2	BELL	125.9	1.5e-40	294	365	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+kk+kLls+l+eVd+rY+qy++q+++v+ssF+ vag g+akpYt+lAl++iSrhFrcL dai++qi XP_021285382.1 294 ERQDLQNKKTKLLSMLDEVDRRYRQYYHQMKIVVSSFDFVAGSGAAKPYTALALQTISRHFRCLHDAISGQI 365 799********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MATYYPTFSY QRDNLSTTYL GDQKPDSYLG SSSLPGNSMY LNQASSAGAF SEILSGSSLS 60 LQNCVQIPSI GGRNEMSFIP PSNDTVSLQA VDGQLNITTS NSLCNPVAGD PPVIPRSVLD 120 GEQSSQSQGL SLSLGSRISS GVSIPPFHYQ YQGYSSFFSG HLPFSGKGTI PCTGDESKKS 180 KELKFSDGVQ CGFPGGNNDA FETDALSNPQ GSISHKQMHS DTYQFESGFA NTISSSKYLR 240 VAQELLDEVI NIRKALKQRD LDKNISSQPK SSNGMSSEPS ESVNNSSSEI SPAERQDLQN 300 KKTKLLSMLD EVDRRYRQYY HQMKIVVSSF DFVAGSGAAK PYTALALQTI SRHFRCLHDA 360 ISGQIQLIQR SLGEQENSSN NQGGAIPRLR YVDHQLRQQR ALQQLGVMRN AWRPQRGLPE 420 SSVSILRAWL FEHFLHPYPK DSEKIMLAKQ TGLTRNQVAN WFINARVRLW KPMIEEMYKE 480 EFGEMDSNFK SSLENAAKAT RENSSASEDR GEELQESMTS KVADADNVQP GQIQLLKPDH 540 VTDVELNRPI ARSMFQNNAI GDTRSPAGMK LQVDNRSNME SHNPYPDTVI PSSQHGRGTL 600 VAGDAMYDLT ELSGFTVGGQ VSLALGLRHD ENNNVFPISG ETTMRGNSKV ASSVGPETVD 660 FHCMDPGNQQ DRFGNPHIFH DFVV

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MATYYPTFSY QRDNLSTTYL GDQKPDSYLG SSSLPGNSMY LNQASSAGAF SEILSGSSLS  60
LQNCVQIPSI GGRNEMSFIP PSNDTVSLQA VDGQLNITTS NSLCNPVAGD PPVIPRSVLD  120
GEQSSQSQGL SLSLGSRISS GVSIPPFHYQ YQGYSSFFSG HLPFSGKGTI PCTGDESKKS  180
KELKFSDGVQ CGFPGGNNDA FETDALSNPQ GSISHKQMHS DTYQFESGFA NTISSSKYLR  240
VAQELLDEVI NIRKALKQRD LDKNISSQPK SSNGMSSEPS ESVNNSSSEI SPAERQDLQN  300
KKTKLLSMLD EVDRRYRQYY HQMKIVVSSF DFVAGSGAAK PYTALALQTI SRHFRCLHDA  360
ISGQIQLIQR SLGEQENSSN NQGGAIPRLR YVDHQLRQQR ALQQLGVMRN AWRPQRGLPE  420
SSVSILRAWL FEHFLHPYPK DSEKIMLAKQ TGLTRNQVAN WFINARVRLW KPMIEEMYKE  480
EFGEMDSNFK SSLENAAKAT RENSSASEDR GEELQESMTS KVADADNVQP GQIQLLKPDH  540
VTDVELNRPI ARSMFQNNAI GDTRSPAGMK LQVDNRSNME SHNPYPDTVI PSSQHGRGTL  600
VAGDAMYDLT ELSGFTVGGQ VSLALGLRHD ENNNVFPISG ETTMRGNSKV ASSVGPETVD  660
FHCMDPGNQQ DRFGNPHIFH DFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-108	TALE family protein