PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021285335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 25644.1 Da PI: 8.3889 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.4 | 3.1e-14 | 37 | 84 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++h+e+ErrRR+riN +++Lr+llP+ +K +Ka+ L ++v+++++L XP_021285335.1 37 CKSHKEAERRRRQRINAHLSTLRSLLPNT-----TKTDKASLLAEVVHHVREL 84 789*************************9.....8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MFPLKSFCGL ENNSPFNLTE GEDSIKTLSE KKSTEACKSH KEAERRRRQR INAHLSTLRS 60 LLPNTTKTDK ASLLAEVVHH VRELRRQVED VARRDVDGCC SKSQPELESW PFPGERDEAA 120 LSLYDKEAKL LKATVCCEDR PGLNHDLNRV IRSVQARVVR AEMTTVGGRT KSVVVMQWGG 180 DVEEIGPLER ALKDVVANRV SVLAHGEGRK RARVIASDNE NGSGFLVDSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 2e-32 | bHLH family protein |