PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021285122.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GATA | ||||||||
Protein Properties | Length: 358aa MW: 38660.6 Da PI: 4.4384 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49.7 | 5e-16 | 213 | 249 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_021285122.1 213 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 249 *******99*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence |
MAAANPQPLQ ARLFEEHTQG TIQIEDDDGE YEDDAMDDVE DANVNSVNVA EHGIGVVGGV 60 SGGGGGAGGG VVMASRTSEL TLSFEGEVYV FPAVTPEKVQ AVLLLLGGRD IPTGVPTIEV 120 PFDQNNRGVG DLPKRSNLSR RIASLVRFRE KRKERCFDKK IRYTVRKEVA QRMHRKNGQF 180 ASLKESTSAS SWDSSQTGVQ DGTPHPETVV RRCQHCGVSE NNTPAMRRGP AGPRTLCNAC 240 GLMWANKGTL RDLSKGGRNI SMDQTEPETP IDVKPSIMEG DFPGNQDEHG NPSKDVTDGS 300 NNASINPDEE DLHESAEDLT NSLPMGIVHP SADDDEQEPL VELANPSDTE ISIPSNFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 2e-69 | GATA family protein |