PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021285101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 29091.1 Da PI: 6.8623 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.1 | 6.4e-13 | 54 | 101 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h Er RR+++++ f L llP++ K +K++i+ +Av YIk+Lq XP_021285101.1 54 MHIWTERERRKKMKNMFCSLHALLPQL----PAKADKSTIVDEAVTYIKNLQ 101 56678*********************6....39******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MKPYNSSSNS PDIDMEMGTV AIAQGVQKRS RKGGFTNGKA KVCGDAGDQS VHEMHIWTER 60 ERRKKMKNMF CSLHALLPQL PAKADKSTIV DEAVTYIKNL QQTLQKLQQQ KLEKLRSATV 120 VDYDQSSIIT SQVQVPESRE AFLADQGPSN NYPMTTDVSQ TFPACFQTWF SPNVVINMCG 180 DDAQISVCSP RKPGVFTTIL YILEKHQLEV VSAHISSDQY RSMYMIHVHA GGASDQFSEA 240 VSVEETFKLA AGEMNLWLLS C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 28 | 67 | KRSRKGGFTNGKAKVCGDAGDQSVHEMHIWTERERRKKMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 1e-38 | bHLH family protein |