PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284967.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 263aa    MW: 28690.7 Da    PI: 9.9461
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.6e-08170210954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_021284967.1 170 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 210
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEIDQLKSAT EEQMAMMMMV QMDKLPEFYG AYNDVVELSP AELAGASSNS SNNSISTATP  60
HFVENPHVGN SPPFMNLPTN ISFTGSTPVQ EAGPPGFLSS PGSARWRGAG ESSGATAFST  120
LSQKKNSMAA MREMIFRIAA MQPIHIDPES VKPPKRRNVR ISKDPQSVAA RHRRERISER  180
IRILQRLVPG GTKMDTASML DEAIHYVKFL KTQVQSLERV AANRPAGIGF PVAMSNGSFL  240
PMGKAYQPTQ NAQQFGDANH LAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.13e-43bHLH family protein