PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284864.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 333aa MW: 37647.9 Da PI: 9.6475 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.4e-18 | 17 | 62 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G +W++Ia++++ gR++k+c++rw++ XP_021284864.1 17 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 62 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 60.3 | 4.2e-19 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ XP_021284864.1 69 RRPFTEEEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 112 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MEDSGAASSD DVKTCPRGHW RPAEDEKLRQ LVEQYGAQNW NSIAEKLQGR SGKSCRLRWF 60 NQLDPRINRR PFTEEEEERL LAAHRIHGNK WALIARLFPG RTDNAVKNHW HVIMARKQRE 120 QSKLCGKRSF QDGLSDSKLS SSGFTPRKAR CQEAFSSRIG FGDSRFFEFQ NPSKERIFSV 180 SYSSTSSPSW TFASSTMMAS NNSTSAELSR RDGKDYLSGS GSSYYSMENS KFLDQSLYKY 240 HSNASAYSSS LKNPSAFGLP NYRRVVPSPF GYLKLGDNYE SNNGVMKKEL MSVIDNAPKL 300 ANIRVSSQQE DDDDSIKQKD IPFIDFLGVG ISS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 9e-64 | MYB family protein |