PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284755.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 249aa MW: 27873.2 Da PI: 9.229 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.1 | 2e-18 | 35 | 80 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G ++W++I+r++ gR++k+c++rw + XP_021284755.1 35 KGPWSAEEDRILTRLVERYGARNWSLISRYIK-GRSGKSCRLRWCNQ 80 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.8e-17 | 89 | 131 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_021284755.1 89 PFSPAEDETILAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 131 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MEAMNRCSSS TSSSDTSSSE SSLSARASNK AEKIKGPWSA EEDRILTRLV ERYGARNWSL 60 ISRYIKGRSG KSCRLRWCNQ LSPSVEHRPF SPAEDETILA AHARYGNRWA TIARLLPGRT 120 DNAVKNHWNS TLKRRARGGQ QQQQQEQQQQ MLLHQQEQVV QSHQQMEGGD NALGSVGMMM 180 DEEALTALTL APPGSGVPSG SAVVLAERRS RDERVPAEFW DVMRDVIARE VREYMTTTIS 240 AETPGFPLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 3e-59 | MYB family protein |