PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021284753.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 394aa MW: 44103.6 Da PI: 5.8224

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021284753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.6	9.9e-53	21	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp+GfrFhPtdeel+++yL+ kv + ++ i+evd++++ePw+Lp +k +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+s+ XP_021284753.1 21 LPRGFRFHPTDEELITFYLASKVFNGSFCG-VEIAEVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSA 114 799**********************877.45***********8888899**********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+l g+kktLvfy+grap+gekt+Wvmheyrl XP_021284753.1 115 sSGALLGMKKTLVFYRGRAPRGEKTKWVMHEYRL 148 78889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MLSVEELLSE LAXEELNEQG LPRGFRFHPT DEELITFYLA SKVFNGSFCG VEIAEVDLNR 60 CEPWELPDVA KMGEREWYFF SLRDRKYPTG LRTNRATGAG YWKATGKDRE VYSASSGALL 120 GMKKTLVFYR GRAPRGEKTK WVMHEYRLDG DFSYRHACKE EWVICRIFHK TGEKKTALAQ 180 GQSFILEVSS SPTSSLPPLL ETPTAFLESQ SQTPMQAQNS FVIHRQENDL KSLINPVVSQ 240 SPLFPANGLQ VQPSFSANPT TIASSITNTT DKNAATDTSN PSASMLFKSL LSHQDCILKE 300 QATIPKQCKT EANFSHFQLP DASLNWMDKI HPNPCQNPLF FEMDCSVLGF SEGVTAGDAT 360 VHDMSTSIAF NRAGVQMMLD PHIRAPGESW QLDC

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MLSVEELLSE LAXEELNEQG LPRGFRFHPT DEELITFYLA SKVFNGSFCG VEIAEVDLNR  60
CEPWELPDVA KMGEREWYFF SLRDRKYPTG LRTNRATGAG YWKATGKDRE VYSASSGALL  120
GMKKTLVFYR GRAPRGEKTK WVMHEYRLDG DFSYRHACKE EWVICRIFHK TGEKKTALAQ  180
GQSFILEVSS SPTSSLPPLL ETPTAFLESQ SQTPMQAQNS FVIHRQENDL KSLINPVVSQ  240
SPLFPANGLQ VQPSFSANPT TIASSITNTT DKNAATDTSN PSASMLFKSL LSHQDCILKE  300
QATIPKQCKT EANFSHFQLP DASLNWMDKI HPNPCQNPLF FEMDCSVLGF SEGVTAGDAT  360
VHDMSTSIAF NRAGVQMMLD PHIRAPGESW QLDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	5e-98	NAC family protein