PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB_related | ||||||||
Protein Properties | Length: 86aa MW: 10452.9 Da PI: 4.9858 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.3 | 3.5e-08 | 28 | 67 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +T++E++l ++ ++ G + W++Ia +++ Rt++++ +w XP_021284678.1 28 MTEQEEDLVYRIYRLVGDR-WDLIAGRIP-ERTAEEIERFWI 67 7****************99.*********.*********995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 86 aa Download sequence |
MDERPQKQAK ILKSTSEVSS IEWEFIKMTE QEEDLVYRIY RLVGDRWDLI AGRIPERTAE 60 EIERFWIMRH GEMFADKRNE EKAKFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53200.1 | 9e-36 | MYB_related family protein |