PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284655.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB_related | ||||||||
Protein Properties | Length: 143aa MW: 16798.3 Da PI: 5.7663 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.8 | 1.1e-07 | 85 | 124 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +T++E++l ++ ++ G + W++Ia +++ Rt++++ +w XP_021284655.1 85 MTEQEEDLVYRIYRLVGDR-WDLIAGRIP-ERTAEEIERFWI 124 7****************99.*********.*********995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MSMIISTLGS GVFQGNPLSQ KKEHSTEWKI TTSQPVLPHR QLECIALFST ICCVEKMDER 60 PQKQAKILKS TSEEVSSIEW EFIKMTEQEE DLVYRIYRLV GDRWDLIAGR IPERTAEEIE 120 RFWIMRHGEM FADKRNEEKA KFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53200.1 | 4e-37 | MYB_related family protein |