PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GRAS | ||||||||
Protein Properties | Length: 795aa MW: 87140.9 Da PI: 6.2319 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 325.9 | 8.1e-100 | 434 | 794 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 +lL+++Ae v +g++ aq +Larl+++ sp g+p+qR+a+yf+eAL+ + ++ ++ + ++ ++ +++ ++ a+k+fsevsP+++f ++t XP_021284618.1 434 DLLYKAAELVGTGNFLHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLVIM--NNSVSPPHLRSPTPFDVIFKMGAYKVFSEVSPLIQFVNFT 526 79***********************************************9997..5555566666667778************************ PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl..e 190 +Nqa+lea++ ++r+Hi+Dfdi+ G+QW++++q+L R++g+pslRiT+++sp++++ el ++e L +fA+e+gv+fe +vl + l++ + XP_021284618.1 527 CNQALLEALDDADRIHIVDFDIGFGAQWASFMQELPMRSRGSPSLRITAFASPSTHHPIELGFMREILMQFANEIGVSFELEVLNFDCLDQSpyS 621 ***********************************************************************************966655554446 PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285 l ++r +++Ea+aVn+ + + +++ +l++ +L++vk+lsPk+vv +++ +d+n+ +F +++++a++ y lf+sl+a +s++ +k+ XP_021284618.1 622 LPMFRSNENEAVAVNFPV--WSSSNQPSALPN----LLRFVKQLSPKLVVSSDRGCDRNDLPFPQHIIHAFQSYINLFESLDAV-NVTSDAVNKI 709 77888889********99..444455666666....*********************************************665.579******* PP GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 Er+l ++i++ v + + e++ Wr +++aGF+pv++s++a++qa++++++ +++g+rve++++slvl+W + L+svSaWr XP_021284618.1 710 ERFLCVPRIESTVLGRLHA----PEKMPLWRTLFSSAGFSPVTFSNFAETQAECVVKRAQVRGFRVEKRQASLVLCWLQGDLISVSAWR 794 *************998887....9****************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 795 aa Download sequence |
MHFQLQAKGA VELAGFASIC QQDKWIKQQE ANSFSFANSF YYNNEQEPTS VLHMRRSQSP 60 PTSASLXSSS LNGGAAGAGG GGNSTDNTTT TAATIAPPET SLPNNNKXEW ATELQPITSE 120 LDLVPGPGGG QRCNLGLEDW ENMLSESAVS PSQDRSLLRW ITGDVDDHSF GLKQLLQSGS 180 TGPNPGLDFE GNAGLGVVDQ GPGFDPIGSL DSSGPGNVIS SAAPNLGGFP GSGFLPNTGN 240 NGNGKIGSVM PSSSSVGVVN NHKVLGTSVG LNNNIQNPVF TSPANNIGLP VSLPMLYQQQ 300 QQGQYIESQE EKPQILNAQV LMGQQQHPQN PNFCLPLPQE HHLLQPLPKR LNPGNLEFSS 360 QIPKLQFSDA GHELFMRKQQ QQHMGFPHGV QFVPQQKPLM VAKQKVLGPG EEMAQQQQQH 420 QYQLHQQQQA TLFDLLYKAA ELVGTGNFLH AQGILARLNH QLSPVGKPLQ RAAFYFKEAL 480 QLLVIMNNSV SPPHLRSPTP FDVIFKMGAY KVFSEVSPLI QFVNFTCNQA LLEALDDADR 540 IHIVDFDIGF GAQWASFMQE LPMRSRGSPS LRITAFASPS THHPIELGFM REILMQFANE 600 IGVSFELEVL NFDCLDQSPY SLPMFRSNEN EAVAVNFPVW SSSNQPSALP NLLRFVKQLS 660 PKLVVSSDRG CDRNDLPFPQ HIIHAFQSYI NLFESLDAVN VTSDAVNKIE RFLCVPRIES 720 TVLGRLHAPE KMPLWRTLFS SAGFSPVTFS NFAETQAECV VKRAQVRGFR VEKRQASLVL 780 CWLQGDLISV SAWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00150.1 | 1e-120 | GRAS family protein |