PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 283aa MW: 32254.3 Da PI: 6.5091 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 94.9 | 1.3e-29 | 27 | 161 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 lppG+rF P++eel+++yL+ k +++ + + i+e+++y++eP+dLp+ + ++ ++F+ +++k g+r++r +k g+W+ XP_021284454.1 27 LPPGCRFFPSEEELLNHYLTGKNSSDAsdradMYGYDLIRELNLYDYEPSDLPEgvcfvhG--CRGRKRHWFCYTERK---GERNKRRAKGGFWR 116 79********************9998845543333458***************65665332..355666777777775...678899899***** PP NAM 85 atgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 + gk k+v++ ++ lvg+++ +vfy++ + +k+++t W+m ey+l XP_021284454.1 117 KIGKVKDVFDGENVLVGTRTRFVFYEAnSVKKAVRTPWIMYEYAL 161 **********99999**********763778899*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MCNNSDSILP LTEIPGDSSR TRSLYHLPPG CRFFPSEEEL LNHYLTGKNS SDASDRADMY 60 GYDLIRELNL YDYEPSDLPE GVCFVHGCRG RKRHWFCYTE RKGERNKRRA KGGFWRKIGK 120 VKDVFDGENV LVGTRTRFVF YEANSVKKAV RTPWIMYEYA LLHHRKASFV LCRVFVKSRA 180 GNSVSENVLS SCAEESVAAV RHIGIQHDGF LSPDILEAEI NGDDFTKQLD ESVATRSVSV 240 PRFEFPSVVQ PELPNDLVES QLTTNDLWAI VEGHFIELKD LGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36160.1 | 1e-22 | NAC family protein |