PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284421.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 295aa MW: 33252.7 Da PI: 7.4574 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.5 | 1e-52 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++k++++++ + +i+e+d+yk++PwdLp + +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + XP_021284421.1 8 LPPGFRFHPTDEELVMHYLCRKCASQSIAV-PIIAEIDLYKYDPWDLPDLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQ- 100 79*************************999.88***************65556799************************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kk Lvfy g+apkgekt+W+mheyrl XP_021284421.1 101 -PKPVGIKKALVFYAGKAPKGEKTNWIMHEYRL 132 .789***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MTATELQLPP GFRFHPTDEE LVMHYLCRKC ASQSIAVPII AEIDLYKYDP WDLPDLALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPIGQ PKPVGIKKAL VFYAGKAPKG 120 EKTNWIMHEY RLADVDRSVR KKNSLRLDDW VLCRIYNKKG ASEKQPPQGS VTKKASVMAI 180 EDKKPDIGTV GMDPCGLPPA PTGTVNDFVY FDTSESVPRL HTDSSCSEHV VSPEFTCEVQ 240 SEPKWKDWGS TNNNALAFSY NYMDATVDTG FASHFQSNSQ LSPLQDVFMY LQKPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-160 | NAC family protein |