PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 25405.9 Da PI: 7.3886 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.7 | 3.1e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRr g++KKAeELSvLCdaeva+iifs tgkl+ey+s XP_021284389.1 10 KIDNVTARQVTFSKRRRGLFKKAEELSVLCDAEVALIIFSATGKLFEYAS 59 69**********************************************86 PP | |||||||
2 | K-box | 46.9 | 1.1e-16 | 89 | 170 | 17 | 98 |
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++ +L ke +++R++ GedL+ Ls+ eLqqLe+ Le++l+++ ++K e + ++i+ l kk +l eenk+L++k+ XP_021284389.1 89 ENSNHIRLSKEFAVKSHQLRQMRGEDLQGLSIDELQQLEKMLESGLTRVLETKGERISSEISALEKKGAQLLEENKQLKQKM 170 5556667788888778999*************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MAREKIKIRK IDNVTARQVT FSKRRRGLFK KAEELSVLCD AEVALIIFSA TGKLFEYASS 60 SMRDILGRYN VHSNNLNKLD QPSLELQLEN SNHIRLSKEF AVKSHQLRQM RGEDLQGLSI 120 DELQQLEKML ESGLTRVLET KGERISSEIS ALEKKGAQLL EENKQLKQKM VTLCNGKRPI 180 LAESDAAVQE EGVSSESVTN VYSCNSGPTL EDDSSDTSLK LGLPFSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-103 | MIKC_MADS family protein |